News

Attending the 2021 American Association for Cancer Research (AACR) Annual Meeting? Here are a few event and poster sessions you won’t want to miss to learn more about the latest NCI data science, data commons, and cancer research activities.

The U.S. Department of Health and Human Services has launched the “COVID-19 TOPx” technology sprint to develop digital solutions for the effective collection and reporting of COVID-19 diagnostics data. Data scientists, cancer researchers, and the greater public may provide feedback on these solutions in a live virtual demo on April 1, 2021.

NIH’s National Library of Medicine recently released a Request for Information (RFI) on the use of Common Data Elements (CDEs) in the context of research on COVID-19. These comments will be used to inform NIH’s continuing development of guidance on CDE use for COVID-related research. RFI responses are due by May 10, 2021.

The Childhood Cancer Data Initiative invites researchers capable of performing molecular characterizations (e.g., whole exome sequencing, RNA sequencing) to submit a proposal to develop a childhood cancer molecular characterization protocol by April 12, 2021.

The Pediatric Genomic Data Inventory (PGDI) is now available on datascience.cancer.gov for data scientists and cancer researchers. This resource lists known ongoing and completed sequencing projects of pediatric cancer cohorts from the United States and other countries, along with some basic details and reference metadata.

Clinical Proteomic Tumor Analysis Consortium (CPTAC) researchers from the Nesvizhskii Lab at the University of Michigan have developed an extension of its MSFragger flagship software to identify N- and O-linked glycopeptides.

NCI’s Office of Cancer Genomics’ data analysis and experimental observations tool—CTD² Dashboard—aims to make cancer-relevant results from the CTD² Network easier to use. Learn more about recent improvements to the Dashboard.

The Human Cancer Models Initiative’s (HCMI’s) Searchable Catalog now has new features that allow users to easily locate models and their case-associated data in the Genomic Data Commons.

In a recent blog post, Center for Cancer Genomics Director, Dr. Louis Staudt, shares highlights from two journal articles describing NCI’s Genomic Data Commons (GDC). In seven years, the GDC has grown from a vision to a massive, interactive data system with genomic data processing pipelines for all types of researchers to use.

NCI is offering administrative supplements for the adaptation and repackaging of existing broad-based visualization methods that have the potential to make Cancer Moonshot-aligned data more explorable and interpretable by the broader cancer research community.