Cancer Data Science Pulse

High-Performance Computing (HPC)

This blog post, the fifth, concludes our series that discusses the principles underlying the collaborative project "Joint Design of Advanced Computing Solutions for Cancer (JDACS4C)."

NCI continues to identify and link external data sources with SEER data to enable the expansion of longitudinal data to form patient trajectories and to support modeling efforts. To inform the incorporation of those additional sources, NCI compiled an extensive breast cancer recurrence data dictionary to identify recurrence-related data elements across multiple sources, including pathology, radiology, pharmacy, biomarkers, procedures, comorbidities, patient-generated information, and radiation oncology.

This is the third in a series of posts that discuss the principles underlying the three-year collaborative program "Joint Design of Advanced Computing Solutions for Cancer (JDACS4C)."

This is the second of a series of posts that discuss the principles underlying the three-year collaborative program “Joint Design of Advanced Computing Solutions for Cancer (JDACS4C).”

This is the first of a series of posts that discuss the pilot collaborative program “Joint Design of Advanced Computing Solutions for Cancer (JDACS4C)” being pursued by the National Cancer Institute (NCI) and the Department of Energy (DOE).

In recent years, genomics has been described as a big data science on par with the likes of Twitter, YouTube, and the scientific pursuit of understanding the universe.

The recent weeks have been momentous as the high-performance computing (HPC) community embraced the challenge of precision medicine. The theme of this year's leading international supercomputing conference, SC16, was "HPC Matters" and it was evident that HPC matters to precision medicine and that precision medicine matters to the high-performance computing community.