Seminar Series
Dr. Noémie Elhadad
January 13, 2021 11:00 a.m. - 12:00 p.m. ET
Virtual

Noémie Elhadad, Ph.D.

Dr. Noémie Elhadad will show how patient-record summation tools can help clinicians make sense of seemingly overwhelming amounts of patient data at the point of care.

Dr. Nicolas Fernandez
December 02, 2020 11:00 a.m. - 12:00 p.m. ET
Virtual

Nicolas Fernandez, Ph.D.

Dr. Nicolas Fernandez will demonstrate the latest version of Clustergrammer2, a visualization tool that allows users to perform more refined clustering on cell lines and genes.

James Zou, Ph.D.
November 18, 2020 11:00 a.m. - 12:00 p.m. ET
Virtual

James Zou, Ph.D.

Dr. James Zou will present new computer vision algorithms and describe how these can help identify the morphologies and phenotypes associated with complex diseases, such as cancer. He will also discuss the general principles behind this technology as well as current machine learning tools, such as Ghorbani, NeurIPS 2020, Abid, and Nature MI 2020.

Gabor Marth
March 11, 2020 11:00 a.m. - 12:00 p.m. ET
NCI Shady Grove, 9609 Medical Center Drive, Room 2W032/034 and via Webinar

Gabor Marth, D.Sc.

In this talk, Dr. Gabor Marth will present the Functional Precision Oncology Initiative, which combines model-based drug screening with multi-omic and subclonal analyses of the tumor to predict the extent of the response.

Guilherme Del Fiol, M.D., Ph.D., and Richard Bradshaw, Ph.D.
February 26, 2020 11:00 a.m. - 12:00 p.m. ET
NCI Shady Grove, 9609 Medical Center Drive, Room 2W032/034, and via Webinar

Guilherme Del Fiol, M.D., Ph.D., and Richard Bradshaw, Ph.D.

Drs. Del Fiol and Bradshaw will discuss OpenCDS, a clinical decision support platform, and show how it can be integrated with electronic health records (EHRs) to identify and manage patients who may benefit from genetic evaluation of their hereditary cancer risk.

Kym Pagel
January 29, 2020 11:00 a.m. - 12:00 p.m. ET
NCI Shady Grove, 9609 Medical Center Drive, Room 2W910/912, and via Webinar

Kym Pagel, Ph.D.

Dr. Pagel will present OpenCRAVAT, a new open source, scalable decision support system for studying gene variants and gene prioritization.

Drs. Griffin and Jagtap
January 15, 2020 11:00 a.m. - 12:00 p.m. ET
NCI Shady Grove, 9609 Medical Center Drive, Room 2E032/034 and via Webinar

Tim Griffin, Ph.D. and Pratik Jagtap, Ph.D., M.Sc

In this talk, Dr. Griffin and Dr. Jagtap will present short demonstrations of multi-omic tools and validated workflows and discuss application and access to these resources.

Jeremy Warner, M.D.
December 18, 2019 11:00 a.m. - 12:00 p.m. ET
NCI Shady Grove, 9609 Medical Center Drive, Room 1W032/034, and via Webinar

Jeremy Warner, M.D., M.S.

In this talk, Dr. Warner will describe the rationale, data model, and initial contents of the HemOnc vocabulary along with several use cases for which it may be valuable.

Josh Campbell, Ph.D. and W. Evan Johnson, Ph.D.
December 04, 2019 11:00 a.m. - 12:00 p.m. ET
NCI Shady Grove, 9609 Medical Center Drive, Room 1W032/034, and via Webinar

Josh Campbell, Ph.D. and W. Evan Johnson, Ph.D.

Dr. Campbell and Dr. Johnson will present the Single Cell Toolkit (SCTK), an R package and interactive single cell RNA-sequencing (scRNA-Seq) analysis package that provides the first complete workflow for scRNA-Seq data analysis and visualization using a set of R functions and an interactive web interface.

Rebecca Rosen, Ph.D.
November 06, 2019 11:00 a.m. - 12:00 p.m. ET
NCI Shady Grove, 9609 Medical Center Drive, Room 2E908, and via Webinar

Rebecca Rosen, Ph.D.

Dr. Rosen will present an overview of the NIMH Data Archive (NDA) and how the program has integrated with the NIH, grants management, and the researcher community.